STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VPS4AUncharacterized protein; Belongs to the AAA ATPase family. (498 aa)    
Predicted Functional Partners:
VTA1
Vesicle trafficking 1.
   
 0.999
CHMP1A
Charged multivesicular body protein 1A.
   
 0.999
VPS4B
Vacuolar protein sorting 4 homolog B; Belongs to the AAA ATPase family.
  
 
0.997
CHMP5
Charged multivesicular body protein 5.
   
 0.996
MLKL
Mixed lineage kinase domain like pseudokinase.
    
 0.993
CHMP4C
Charged multivesicular body protein 4C.
    
 0.979
CHMP6
Charged multivesicular body protein 6.
    
 0.978
CHMP2A
Charged multivesicular body protein 2A.
    
 0.977
CHMP2B
Charged multivesicular body protein 2B.
   
 0.971
LOC101000776
Uncharacterized protein.
   
 0.954
Your Current Organism:
Papio anubis
NCBI taxonomy Id: 9555
Other names: Anubis baboon, Doguera baboon, Kenya baboon, P. anubis, Papio cynocephalus anubis, Papio doguera, Papio hamadryas anubis, Papio hamadryas doguera, baboon, olive baboon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.