Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LAPTM4BLysosomal protein transmembrane 4 beta. (226 aa)    
Predicted Functional Partners:
LAPTM5
Lysosomal protein transmembrane 5.
     
0.915
LAPTM4A
Lysosomal protein transmembrane 4 alpha.
  
 
 
0.909
TNFRSF10B
TNF receptor superfamily member 10b.
    
   0.758
NEDD4
NEDD4 E3 ubiquitin protein ligase.
    
 
 0.678
RETREG1
Reticulophagy regulator 1.
    
   0.664
TNFRSF10A
TNF receptor superfamily member 10a.
    
   0.643
TMEM231
Transmembrane protein 231.
    
   0.634
TMBIM6
Transmembrane BAX inhibitor motif containing 6.
   
    0.562
TRIT1
tRNA isopentenyltransferase 1.
      
 0.552
GOLGA7
Golgin A7.
   
 
 0.533
Your Current Organism:
Theropithecus gelada
NCBI taxonomy Id: 9565
Other names: T. gelada, bleeding heart baboon, gelada, gelada baboon
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