Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
SPECC1Sperm antigen with calponin homology and coiled-coil domains 1. (1068 aa)    
Predicted Functional Partners:
ANLN
Anillin actin binding protein.
   
 
 0.772
LOC112617191
Protocadherin gamma-B1.
    
   0.647
ENSTGEP00000006660
annotation not available
    
   0.647
STK39
Serine/threonine kinase 39.
      
 0.600
PRSS57
Serine protease 57.
      
 0.594
SH2D3C
SH2 domain containing 3C.
      
 0.594
SH2D3A
SH2 domain containing 3A.
      
 0.591
CCBE1
Collagen and calcium binding EGF domains 1.
      
 0.549
SLC25A39
Solute carrier family 25 member 39.
   
  
 0.507
OXSR1
Oxidative stress responsive kinase 1.
      
 0.487
Your Current Organism:
Theropithecus gelada
NCBI taxonomy Id: 9565
Other names: T. gelada, bleeding heart baboon, gelada, gelada baboon
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