Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SORT1Sortilin 1. (831 aa)    
Predicted Functional Partners:
NGFR
Nerve growth factor receptor.
    
 0.992
GGA1
Golgi associated, gamma adaptin ear containing, ARF binding protein 1.
    
 
 0.953
NTS
Neurotensin.
   
 
 0.949
BDNF
Brain derived neurotrophic factor.
    
 
 0.931
APOB
Apolipoprotein B.
     
 0.926
GRN
Granulin precursor.
    
 
 0.920
NGF
Nerve growth factor.
    
 
 0.918
LRPAP1
LDL receptor related protein associated protein 1.
    
 
 0.909
SORCS1
Sortilin related VPS10 domain containing receptor 1.
    
 
 0.908
NTRK2
Neurotrophic receptor tyrosine kinase 2.
    
 
 0.855
Your Current Organism:
Theropithecus gelada
NCBI taxonomy Id: 9565
Other names: T. gelada, bleeding heart baboon, gelada, gelada baboon
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