Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC112620166S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase. (732 aa)    
Predicted Functional Partners:
PWP1
PWP1 homolog, endonuclein.
   
 
 0.771
TYW3
tRNA-yW synthesizing protein 3 homolog.
  
  
 0.765
IMP4
IMP U3 small nucleolar ribonucleoprotein 4.
   
   0.757
MMS19
MMS19 homolog, cytosolic iron-sulfur assembly component.
    
 
 0.749
ENDOV
Endonuclease V.
    
  0.736
UROD
Uroporphyrinogen decarboxylase.
    
  0.736
WDR17
WD repeat domain 17.
   
 
 0.693
WDR36
WD repeat domain 36.
   
    0.686
TRMT5
tRNA methyltransferase 5.
   
 
 0.678
CIAO2B
Cytosolic iron-sulfur assembly component 2B.
    
 
 0.644
Your Current Organism:
Theropithecus gelada
NCBI taxonomy Id: 9565
Other names: T. gelada, bleeding heart baboon, gelada, gelada baboon
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.