STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEC16BSEC16 homolog B, endoplasmic reticulum export factor. (1059 aa)    
Predicted Functional Partners:
SEC24C
SEC24 homolog C, COPII coat complex component.
   
 0.989
SEC24D
SEC24 homolog D, COPII coat complex component.
   
 0.952
ENSTGEP00000002890
annotation not available
   
 0.937
SEC24A
SEC24 homolog A, COPII coat complex component.
   
 0.937
ENSTGEP00000000132
annotation not available
    
 0.936
SEC13
SEC13 homolog, nuclear pore and COPII coat complex component.
    
 0.936
SEC23A
Sec23 homolog A, coat complex II component.
   
 0.934
SEC23B
SEC23 homolog B, coat complex II component.
   
 0.934
SEC31A
SEC31 homolog A, COPII coat complex component.
   
 0.879
SEC31B
SEC31 homolog B, COPII coat complex component.
   
 0.853
Your Current Organism:
Theropithecus gelada
NCBI taxonomy Id: 9565
Other names: T. gelada, bleeding heart baboon, gelada, gelada baboon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.