Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
COL25A1Collagen type XXV alpha 1 chain. (696 aa)    
Predicted Functional Partners:
FURIN
Furin, paired basic amino acid cleaving enzyme.
     
 0.725
APP
Amyloid beta precursor protein.
    
 0.716
PADI3
Peptidyl arginine deiminase 3.
      
 0.712
PCSK4
Proprotein convertase subtilisin/kexin type 4.
     
 0.705
PLK5
Polo like kinase 5.
    
 0.680
COL23A1
Collagen type XXIII alpha 1 chain.
     
 0.660
COL26A1
Collagen type XXVI alpha 1 chain.
     
 0.641
EMID1
EMI domain containing 1.
     
 0.641
NLGN1
Neuroligin 1.
    
 
 0.595
NLGN4Y
Neuroligin 4 X-linked.
    
 
 0.572
Your Current Organism:
Theropithecus gelada
NCBI taxonomy Id: 9565
Other names: T. gelada, bleeding heart baboon, gelada, gelada baboon
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