STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VPS13BVacuolar protein sorting 13 homolog B. (3915 aa)    
Predicted Functional Partners:
VPS13A
Vacuolar protein sorting 13 homolog A.
   
  
0.663
GAK
Cyclin G associated kinase.
    
 
 0.572
DNAJC6
DnaJ heat shock protein family (Hsp40) member C6.
    
 
 0.507
ZNF462
Zinc finger protein 462.
      
 0.480
SLC25A1
Solute carrier family 25 member 1.
      
 0.480
H2AJ
H2A.J histone.
      
 0.478
PCYOX1L
Prenylcysteine oxidase 1 like.
      
 0.477
MAP3K7
Mitogen-activated protein kinase kinase kinase 7.
      
 0.476
ACSL3
acyl-CoA synthetase long chain family member 3.
      
 0.475
PGAP2
post-GPI attachment to proteins 2.
   
  
 0.473
Your Current Organism:
Theropithecus gelada
NCBI taxonomy Id: 9565
Other names: T. gelada, bleeding heart baboon, gelada, gelada baboon
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.