STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KDM1ALysine demethylase 1A. (876 aa)    
Predicted Functional Partners:
RCOR1
REST corepressor 1.
   
 0.993
HMG20B
High mobility group 20B.
   
 0.976
PHF21A
PHD finger protein 21A.
    
 0.973
RCOR3
REST corepressor 3.
   
 0.963
HDAC2
Histone deacetylase 2.
   
 0.960
RCOR2
REST corepressor 2.
   
 0.960
ZNF516
Zinc finger protein 516.
    
 0.959
ENSTGEP00000019937
annotation not available
   
 0.932
ENSTGEP00000031917
annotation not available
   
 0.932
CTBP1
C-terminal binding protein 1.
    
 0.926
Your Current Organism:
Theropithecus gelada
NCBI taxonomy Id: 9565
Other names: T. gelada, bleeding heart baboon, gelada, gelada baboon
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