STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LARP7La ribonucleoprotein 7, transcriptional regulator. (589 aa)    
Predicted Functional Partners:
MEPCE
Methylphosphate capping enzyme.
    
 
 0.987
CDK9
Cyclin dependent kinase 9.
   
 0.935
HEXIM1
HEXIM P-TEFb complex subunit 1.
    
 
 0.922
CCNT1
Cyclin T1.
   
 0.900
HEXIM2
HEXIM P-TEFb complex subunit 2.
    
 
 0.879
LYAR
Ly1 antibody reactive.
   
  
 0.850
CCNT2
Cyclin T2.
   
 0.809
ZC3H8
Zinc finger CCCH-type containing 8.
   
   0.753
DDX21
DExD-box helicase 21.
   
 0.713
MPHOSPH10
M-phase phosphoprotein 10.
   
 
 0.697
Your Current Organism:
Theropithecus gelada
NCBI taxonomy Id: 9565
Other names: T. gelada, bleeding heart baboon, gelada, gelada baboon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.