STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SREBF1Sterol regulatory element binding transcription factor 1. (1179 aa)    
Predicted Functional Partners:
SCAP
SREBF chaperone.
   
 0.966
PPARGC1B
PPARG coactivator 1 beta.
    
 0.943
NPC1
NPC intracellular cholesterol transporter 1.
   
 0.887
NPC1L1
NPC1 like intracellular cholesterol transporter 1.
   
 0.886
KPNB1
Karyopherin subunit beta 1.
    
 0.883
EP300
E1A binding protein p300.
    
 0.848
FBXW7
F-box and WD repeat domain containing 7.
    
 0.842
MED15
Mediator complex subunit 15.
    
 
 0.812
MBTPS2
Membrane bound transcription factor peptidase, site 2.
    
 0.779
CREBBP
CREB binding protein.
    
 0.776
Your Current Organism:
Theropithecus gelada
NCBI taxonomy Id: 9565
Other names: T. gelada, bleeding heart baboon, gelada, gelada baboon
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