STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RABL6RAB, member RAS oncogene family like 6. (728 aa)    
Predicted Functional Partners:
TRAPPC1
Trafficking protein particle complex 1.
    
 0.823
TRAPPC8
Trafficking protein particle complex 8.
    
 0.818
TRAPPC4
Trafficking protein particle complex 4.
    
 0.815
TRAPPC5
Trafficking protein particle complex 5.
    
 0.812
VPS33B
VPS33B late endosome and lysosome associated.
    
 
 0.730
VPS33A
VPS33A core subunit of CORVET and HOPS complexes.
    
 
 0.717
TRAPPC6B
Trafficking protein particle complex 6B.
    
 0.701
TRAPPC6A
Trafficking protein particle complex 6A.
    
 0.701
USO1
USO1 vesicle transport factor.
   
 0.698
RABIF
RAB interacting factor.
    
 
 0.698
Your Current Organism:
Theropithecus gelada
NCBI taxonomy Id: 9565
Other names: T. gelada, bleeding heart baboon, gelada, gelada baboon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.