STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRPF39pre-mRNA processing factor 39. (669 aa)    
Predicted Functional Partners:
SF3B1
Splicing factor 3b subunit 1.
   
 
 0.953
RBM25
RNA binding motif protein 25.
   
 
 0.935
SNRNP70
Small nuclear ribonucleoprotein U1 subunit 70.
   
 
 0.934
CDC5L
Cell division cycle 5 like.
   
 
 0.934
SNRPA1
Small nuclear ribonucleoprotein polypeptide A.
    
 
 0.924
SNRPN
Small nuclear ribonucleoprotein polypeptide N.
    
 
 0.917
TRNAU1AP
tRNA selenocysteine 1 associated protein 1.
   
 
 0.899
C6orf52
Chromosome 4 C6orf52 homolog.
   
 
 0.899
PNISR
PNN interacting serine and arginine rich protein.
   
  
 0.898
PRPF40B
pre-mRNA processing factor 40 homolog B.
    
 
 0.893
Your Current Organism:
Theropithecus gelada
NCBI taxonomy Id: 9565
Other names: T. gelada, bleeding heart baboon, gelada, gelada baboon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.