STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MAGOHMago homolog, exon junction complex subunit. (146 aa)    
Predicted Functional Partners:
RBM8A
RNA binding motif protein 8A.
   
 0.992
UPF3A
UPF3A regulator of nonsense mediated mRNA decay.
    
 0.985
UPF3B
UPF3B regulator of nonsense mediated mRNA decay.
    
 0.985
EIF4A3
Eukaryotic translation initiation factor 4A3.
   
 0.952
CASC3
CASC3 exon junction complex subunit.
    
 0.940
ALYREF
Aly/REF export factor.
   
 0.912
PYM1
PYM homolog 1, exon junction complex associated factor.
    
 
 0.885
POLDIP3
DNA polymerase delta interacting protein 3.
   
 0.884
SNRPF
Small nuclear ribonucleoprotein polypeptide F.
   
 
 0.876
MAGOHB
Mago homolog B, exon junction complex subunit.
  
  
 
0.875
Your Current Organism:
Theropithecus gelada
NCBI taxonomy Id: 9565
Other names: T. gelada, bleeding heart baboon, gelada, gelada baboon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.