STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPATA17Spermatogenesis associated 17. (361 aa)    
Predicted Functional Partners:
LRGUK
Leucine rich repeats and guanylate kinase domain containing.
    
 
 0.699
RABL2B
RAB, member of RAS oncogene family like 2B.
   
 0.615
RAB25
RAB25, member RAS oncogene family.
   
 0.615
RAB11B
RAB11B, member RAS oncogene family.
   
 0.615
RAB11A
RAB11A, member RAS oncogene family.
   
 0.615
EXOC4
Exocyst complex component 4.
    
 0.553
SPATA4
Spermatogenesis associated 4.
   
  
 0.500
CCDC136
Coiled-coil domain containing 136.
   
 0.485
RRP15
Ribosomal RNA processing 15 homolog.
      
 0.481
KCTD3
Potassium channel tetramerization domain containing 3.
      
 0.481
Your Current Organism:
Theropithecus gelada
NCBI taxonomy Id: 9565
Other names: T. gelada, bleeding heart baboon, gelada, gelada baboon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.