STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHD1Chromodomain helicase DNA binding protein 1. (1712 aa)    
Predicted Functional Partners:
H3-4
H3.4 histone.
    
 0.907
RANBP2
RAN binding protein 2.
   
 
  0.803
SSRP1
FACT complex subunit SSRP1.
    
 
 0.764
NIPBL
NIPBL cohesin loading factor.
   
 
 0.737
SUPT16H
SPT16 homolog, facilitates chromatin remodeling subunit.
   
 
 0.732
FANCM
FA complementation group M.
    
 0.726
SUPT5H
SPT5 homolog, DSIF elongation factor subunit.
   
 
 0.723
RTF1
RTF1 homolog, Paf1/RNA polymerase II complex component.
   
 
 0.722
ENSTGEP00000009822
annotation not available
    
 0.712
ENSTGEP00000015032
annotation not available
    
 0.712
Your Current Organism:
Theropithecus gelada
NCBI taxonomy Id: 9565
Other names: T. gelada, bleeding heart baboon, gelada, gelada baboon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.