Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BRIX1 | DDX18 | ENSTGEP00000007331 | ENSTGEP00000003032 | Biogenesis of ribosomes BRX1. | DEAD-box helicase 18. | 0.992 |
BRIX1 | EBNA1BP2 | ENSTGEP00000007331 | ENSTGEP00000032193 | Biogenesis of ribosomes BRX1. | EBNA1 binding protein 2. | 0.997 |
BRIX1 | ENSTGEP00000000003 | ENSTGEP00000007331 | ENSTGEP00000000003 | Biogenesis of ribosomes BRX1. | annotation not available | 0.982 |
BRIX1 | GTPBP4 | ENSTGEP00000007331 | ENSTGEP00000025777 | Biogenesis of ribosomes BRX1. | GTP binding protein 4. | 0.993 |
BRIX1 | MAK16 | ENSTGEP00000007331 | ENSTGEP00000007475 | Biogenesis of ribosomes BRX1. | MAK16 homolog. | 0.986 |
BRIX1 | RPF1 | ENSTGEP00000007331 | ENSTGEP00000025105 | Biogenesis of ribosomes BRX1. | Ribosome production factor 1 homolog. | 0.993 |
BRIX1 | RRP1B | ENSTGEP00000007331 | ENSTGEP00000025029 | Biogenesis of ribosomes BRX1. | Ribosomal RNA processing 1B. | 0.983 |
BRIX1 | RSL1D1 | ENSTGEP00000007331 | ENSTGEP00000031966 | Biogenesis of ribosomes BRX1. | Ribosomal L1 domain containing 1. | 0.989 |
BRIX1 | WDR12 | ENSTGEP00000007331 | ENSTGEP00000000668 | Biogenesis of ribosomes BRX1. | WD repeat domain 12. | 0.992 |
BRIX1 | WDR74 | ENSTGEP00000007331 | ENSTGEP00000019004 | Biogenesis of ribosomes BRX1. | WD repeat domain 74. | 0.988 |
DDX18 | BRIX1 | ENSTGEP00000003032 | ENSTGEP00000007331 | DEAD-box helicase 18. | Biogenesis of ribosomes BRX1. | 0.992 |
DDX18 | EBNA1BP2 | ENSTGEP00000003032 | ENSTGEP00000032193 | DEAD-box helicase 18. | EBNA1 binding protein 2. | 0.990 |
DDX18 | ENSTGEP00000000003 | ENSTGEP00000003032 | ENSTGEP00000000003 | DEAD-box helicase 18. | annotation not available | 0.982 |
DDX18 | GTPBP4 | ENSTGEP00000003032 | ENSTGEP00000025777 | DEAD-box helicase 18. | GTP binding protein 4. | 0.993 |
DDX18 | MAK16 | ENSTGEP00000003032 | ENSTGEP00000007475 | DEAD-box helicase 18. | MAK16 homolog. | 0.983 |
DDX18 | RPF1 | ENSTGEP00000003032 | ENSTGEP00000025105 | DEAD-box helicase 18. | Ribosome production factor 1 homolog. | 0.991 |
DDX18 | RRP1B | ENSTGEP00000003032 | ENSTGEP00000025029 | DEAD-box helicase 18. | Ribosomal RNA processing 1B. | 0.975 |
DDX18 | RSL1D1 | ENSTGEP00000003032 | ENSTGEP00000031966 | DEAD-box helicase 18. | Ribosomal L1 domain containing 1. | 0.995 |
DDX18 | WDR12 | ENSTGEP00000003032 | ENSTGEP00000000668 | DEAD-box helicase 18. | WD repeat domain 12. | 0.994 |
DDX18 | WDR74 | ENSTGEP00000003032 | ENSTGEP00000019004 | DEAD-box helicase 18. | WD repeat domain 74. | 0.992 |
page 1 of 6