STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IRX3Homeobox domain-containing protein. (284 aa)    
Predicted Functional Partners:
IRX5
Iroquois homeobox 5.
  
  
0.900
ARID4B
AT-rich interaction domain 4B.
    
 
 0.550
SRF
Serum response factor.
   
 
 0.544
SCUBE2
Signal peptide, CUB domain and EGF like domain containing 2.
    
 
 0.532
USH1C
USH1 protein network component harmonin.
   
  
 0.513
SALL4
Spalt like transcription factor 4.
      
 0.506
ADAMTS18
ADAM metallopeptidase with thrombospondin type 1 motif 18.
      
 0.499
HIVEP3
Human immunodeficiency virus type I enhancer binding protein 3.
    
 0.499
USH2A
Usherin.
    
 
 0.490
GASK1B
Golgi associated kinase 1B.
      
 0.489
Your Current Organism:
Mandrillus leucophaeus
NCBI taxonomy Id: 9568
Other names: M. leucophaeus, Papio leucophaeus, drill
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.