STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TAGLN3Transgelin; Belongs to the calponin family. (199 aa)    
Predicted Functional Partners:
WDR90
WD repeat domain 90.
    
 
 0.807
NME1-NME2
NME1-NME2 readthrough; Belongs to the NDK family.
    
 
 0.621
EFHB
EF-hand domain family member B.
    
   0.601
GPC4
Glypican 4; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.
      
 0.598
WDR1
WD repeat domain 1.
   
 
 0.559
VCL
Vinculin.
     
 0.540
SPEF1
Sperm flagellar 1.
    
 
 0.530
ACTA2
Actin alpha 2, smooth muscle.
   
 0.505
SMTN
Smoothelin.
   
  
 0.505
PACRGL
Parkin coregulated like.
    
 
 0.501
Your Current Organism:
Mandrillus leucophaeus
NCBI taxonomy Id: 9568
Other names: M. leucophaeus, Papio leucophaeus, drill
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.