Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PTX3Pentraxin 3. (381 aa)    
Predicted Functional Partners:
FGF2
Fibroblast growth factor; Belongs to the heparin-binding growth factors family.
    
 
 0.881
TNFAIP6
TNF alpha induced protein 6.
   
 0.860
FCN2
Ficolin 2.
    
 
 0.848
LOC105536265
Uncharacterized protein.
    
 
 0.832
LOC105550779
Uncharacterized protein.
    
 
 0.832
CFHR2
Complement factor H related 2.
    
 
 0.801
CFHR3
Uncharacterized protein.
    
 
 0.784
FCN3
Ficolin 3.
    
 
 0.731
C3
Complement C3.
    
 
 0.710
LOC105547810
Fibrinogen C-terminal domain-containing protein.
    
 
 0.691
Your Current Organism:
Mandrillus leucophaeus
NCBI taxonomy Id: 9568
Other names: M. leucophaeus, Papio leucophaeus, drill
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