Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
REEP1Receptor expression-enhancing protein. (273 aa)    
Predicted Functional Partners:
REEP2
Receptor expression-enhancing protein.
    
 
 0.855
REEP4
Receptor expression-enhancing protein.
    
 
 0.840
RTP2
Receptor transporter protein 2.
     
 0.741
RTP1
Receptor transporter protein 1.
     
 0.729
RTN2
Reticulon.
   
 
 0.724
CAV3
Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.
    
   0.706
REEP3
Receptor expression-enhancing protein.
    
 
 0.700
RHBDF1
Rhomboid 5 homolog 1.
      
 0.662
MEGF11
Multiple EGF like domains 11.
      
 0.662
ATL1
Atlastin GTPase 1.
    
 
 0.655
Your Current Organism:
Mandrillus leucophaeus
NCBI taxonomy Id: 9568
Other names: M. leucophaeus, Papio leucophaeus, drill
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