Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC105536632Uncharacterized protein. (598 aa)    
Predicted Functional Partners:
LAMC1
Laminin subunit gamma 1.
   
 0.846
LAMC3
Laminin subunit gamma 3.
   
 0.807
LAMC2
Laminin subunit gamma 2.
   
 0.755
DAG1
Dystroglycan 1.
    
 0.668
LAMB1
Laminin subunit beta 1.
   
 0.666
NID1
Nidogen 1.
   
 0.590
DMD
ZZ-type domain-containing protein.
   
 
 0.572
LAMB2
Laminin subunit beta 2.
   
 0.556
NID2
Nidogen 2.
   
 0.542
COL6A3
Collagen type VI alpha 3 chain.
   
 0.507
Your Current Organism:
Mandrillus leucophaeus
NCBI taxonomy Id: 9568
Other names: M. leucophaeus, Papio leucophaeus, drill
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