Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FAM50BFamily with sequence similarity 50 member B. (325 aa)    
Predicted Functional Partners:
FAM32A
Family with sequence similarity 32 member A.
    
 0.865
SLU7
SLU7 homolog, splicing factor.
   
 0.859
SYF2
SYF2 pre-mRNA splicing factor.
   
 0.851
SDE2
SDE2 telomere maintenance homolog.
    
 0.847
CACTIN
Cactin, spliceosome C complex subunit.
    
 0.824
CDC40
Cell division cycle 40.
   
  0.808
NKAP
NFKB activating protein.
   
 0.807
CCDC12
Coiled-coil domain containing 12.
    
 0.796
C9orf78
Chromosome 9 open reading frame 78.
    
  0.791
PPWD1
Peptidylprolyl isomerase domain and WD repeat containing 1.
    
  0.791
Your Current Organism:
Mandrillus leucophaeus
NCBI taxonomy Id: 9568
Other names: M. leucophaeus, Papio leucophaeus, drill
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