Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC105549687IF rod domain-containing protein; Belongs to the intermediate filament family. (480 aa)    
Predicted Functional Partners:
LOC105550866
IF rod domain-containing protein; Belongs to the intermediate filament family.
   
 0.854
LOC105538037
IF rod domain-containing protein; Belongs to the intermediate filament family.
   
 0.854
ENSMLEP00000026929
IF rod domain-containing protein; Belongs to the intermediate filament family.
   
 0.854
ENSMLEP00000040190
IF rod domain-containing protein; Belongs to the intermediate filament family.
   
 0.854
KRT19
Keratin 19; Belongs to the intermediate filament family.
   
  0.848
ENSMLEP00000034218
IF rod domain-containing protein; Belongs to the intermediate filament family.
   
  0.848
KRT7
Keratin 7; Belongs to the intermediate filament family.
   
  0.812
KRT75
Keratin 75; Belongs to the intermediate filament family.
   
  0.761
KRT79
Keratin 79; Belongs to the intermediate filament family.
   
  0.741
KRT14
Keratin 14; Belongs to the intermediate filament family.
   
 0.732
Your Current Organism:
Mandrillus leucophaeus
NCBI taxonomy Id: 9568
Other names: M. leucophaeus, Papio leucophaeus, drill
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