Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SYNPRSynaptoporin. (245 aa)    
Predicted Functional Partners:
VAMP2
V-SNARE coiled-coil homology domain-containing protein.
   
 0.925
SNAP25
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.829
ENSMLEP00000031839
Uncharacterized protein.
   
 0.680
VAMP1
Vesicle associated membrane protein 1.
   
 0.680
LNPK
Lunapark, ER junction formation factor.
    
   0.654
SYNGR1
Synaptogyrin 1.
   
 
 0.649
ATP6V0A1
V-type proton ATPase subunit a; Essential component of the vacuolar proton pump (V-ATPase), a multimeric enzyme that catalyzes the translocation of protons across the membranes. Required for assembly and activity of the V-ATPase.
   
   0.639
SLC17A8
Solute carrier family 17 member 8.
   
 
 0.629
SYNGR4
Synaptogyrin.
    
 
 0.591
RAB3C
RAB3C, member RAS oncogene family.
   
 0.577
Your Current Organism:
Mandrillus leucophaeus
NCBI taxonomy Id: 9568
Other names: M. leucophaeus, Papio leucophaeus, drill
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