LOC105536979 protein (Mandrillus leucophaeus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

LOC105536979

40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (115 aa)

Predicted Functional Partners:

ENSMLEP00000021102

0.999

FAU

0.999

RPS9

0.986

RPS28

0.986

RPL30

0.971

RPL12

0.970

RACK1

0.968

RPS21

0.967

ENSMLEP00000006456

0.963

ENSMLEP00000011356

0.963

Your Current Organism:

Mandrillus leucophaeus

NCBI taxonomy Id: 9568
Other names: M. leucophaeus, Papio leucophaeus, drill

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSMLEP00000006456	ENSMLEP00000011356	ENSMLEP00000006456	ENSMLEP00000011356	Uncharacterized protein.	Uncharacterized protein.	0.985
ENSMLEP00000006456	ENSMLEP00000021102	ENSMLEP00000006456	ENSMLEP00000021102	Uncharacterized protein.	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	0.999
ENSMLEP00000006456	FAU	ENSMLEP00000006456	ENSMLEP00000025000	Uncharacterized protein.	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	0.999
ENSMLEP00000006456	LOC105536979	ENSMLEP00000006456	ENSMLEP00000001933	Uncharacterized protein.	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.	0.963
ENSMLEP00000006456	RACK1	ENSMLEP00000006456	ENSMLEP00000017866	Uncharacterized protein.	Receptor for activated C kinase 1.	0.985
ENSMLEP00000006456	RPL12	ENSMLEP00000006456	ENSMLEP00000010102	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uL11 family.	0.988
ENSMLEP00000006456	RPL30	ENSMLEP00000006456	ENSMLEP00000025180	Uncharacterized protein.	Ribosomal protein L30.	0.987
ENSMLEP00000006456	RPS21	ENSMLEP00000006456	ENSMLEP00000024853	Uncharacterized protein.	40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family.	0.982
ENSMLEP00000006456	RPS28	ENSMLEP00000006456	ENSMLEP00000023662	Uncharacterized protein.	Ribosomal protein S28.	0.996
ENSMLEP00000006456	RPS9	ENSMLEP00000006456	ENSMLEP00000005360	Uncharacterized protein.	Ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family.	0.996
ENSMLEP00000011356	ENSMLEP00000006456	ENSMLEP00000011356	ENSMLEP00000006456	Uncharacterized protein.	Uncharacterized protein.	0.985
ENSMLEP00000011356	ENSMLEP00000021102	ENSMLEP00000011356	ENSMLEP00000021102	Uncharacterized protein.	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	0.999
ENSMLEP00000011356	FAU	ENSMLEP00000011356	ENSMLEP00000025000	Uncharacterized protein.	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	0.999
ENSMLEP00000011356	LOC105536979	ENSMLEP00000011356	ENSMLEP00000001933	Uncharacterized protein.	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.	0.963
ENSMLEP00000011356	RACK1	ENSMLEP00000011356	ENSMLEP00000017866	Uncharacterized protein.	Receptor for activated C kinase 1.	0.988
ENSMLEP00000011356	RPL12	ENSMLEP00000011356	ENSMLEP00000010102	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uL11 family.	0.988
ENSMLEP00000011356	RPL30	ENSMLEP00000011356	ENSMLEP00000025180	Uncharacterized protein.	Ribosomal protein L30.	0.989
ENSMLEP00000011356	RPS21	ENSMLEP00000011356	ENSMLEP00000024853	Uncharacterized protein.	40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family.	0.984
ENSMLEP00000011356	RPS28	ENSMLEP00000011356	ENSMLEP00000023662	Uncharacterized protein.	Ribosomal protein S28.	0.995
ENSMLEP00000011356	RPS9	ENSMLEP00000011356	ENSMLEP00000005360	Uncharacterized protein.	Ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family.	0.995