STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DDX39ADExD-box helicase 39A. (435 aa)    
Predicted Functional Partners:
ALYREF
Aly/REF export factor.
   
 0.983
THOC2
THO complex 2.
   
 0.972
POLDIP3
DNA polymerase delta interacting protein 3.
   
 0.966
THOC1
THO complex 1.
   
 0.958
EIF4A3
Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family.
  
0.956
THOC7
THO complex 7.
   
 0.951
RBM8A
RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.
   
 0.948
THOC5
THO complex 5.
   
 0.943
ZC3H13
Zinc finger CCCH-type containing 13.
   
 0.924
THOC6
THO complex 6.
   
 0.920
Your Current Organism:
Mandrillus leucophaeus
NCBI taxonomy Id: 9568
Other names: M. leucophaeus, Papio leucophaeus, drill
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.