STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MSGN1Mesogenin 1. (193 aa)    
Predicted Functional Partners:
TBX6
T-box transcription factor 6.
   
 0.677
SMC6
Structural maintenance of chromosomes 6.
      
 0.612
GEN1
GEN1 Holliday junction 5' flap endonuclease.
      
 0.590
VSNL1
Visinin like 1.
      
 0.563
CCDC14
Coiled-coil domain containing 14.
      
 0.541
TCF4
Transcription factor 4.
    
 0.473
TCF3
BHLH domain-containing protein.
    
 0.473
LOC105534402
BHLH domain-containing protein.
    
 0.473
TCF12
Transcription factor 12.
    
 0.473
LDB1
LIM domain binding 1.
    
 0.414
Your Current Organism:
Mandrillus leucophaeus
NCBI taxonomy Id: 9568
Other names: M. leucophaeus, Papio leucophaeus, drill
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.