STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IRGMImmunity related GTPase M. (159 aa)    
Predicted Functional Partners:
ATG5
Autophagy protein 5; Involved in autophagic vesicle formation.
   
 
 0.563
ATG10
Autophagy_act_C domain-containing protein.
    
 
 0.538
ATG16L1
Autophagy related 16 like 1.
    
 
 0.518
TAPBP
TAP binding protein.
   
 0.510
NOD2
Nucleotide binding oligomerization domain containing 2.
    
 
 0.510
ENSMLEP00000020759
Uncharacterized protein.
    
 
 0.507
BECN1
Beclin 1.
    
 0.441
PLA2G4A
Phospholipase A2.
     
 0.432
NLE1
Notchless homolog 1.
      
 0.422
SH3GLB1
SH3 domain containing GRB2 like, endophilin B1.
    
 0.407
Your Current Organism:
Mandrillus leucophaeus
NCBI taxonomy Id: 9568
Other names: M. leucophaeus, Papio leucophaeus, drill
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.