STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRPF38BPre-mRNA processing factor 38B. (546 aa)    
Predicted Functional Partners:
ENSMLEP00000034242
Uncharacterized protein.
    
   0.843
RBM25
RNA binding motif protein 25.
   
  
 0.819
PNN
Pinin, desmosome associated protein.
   
    0.804
LUC7L3
LUC7 like 3 pre-mRNA splicing factor.
   
 
 0.774
ENSMLEP00000012872
Uncharacterized protein.
    
   0.735
LOC105532189
Uncharacterized protein.
    
   0.735
PRPF4B
Pre-mRNA processing factor 4B.
   
    0.720
ENSMLEP00000024216
Uncharacterized protein.
   
 
 0.719
SRSF11
Serine and arginine rich splicing factor 11.
   
 
 0.719
SREK1
Splicing regulatory glutamic acid and lysine rich protein 1.
   
 
 0.680
Your Current Organism:
Mandrillus leucophaeus
NCBI taxonomy Id: 9568
Other names: M. leucophaeus, Papio leucophaeus, drill
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.