STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HMGXB4HMG-box containing 4. (601 aa)    
Predicted Functional Partners:
CCDC30
Coiled-coil domain containing 30.
      
 0.793
C17orf49
Chromosome 17 open reading frame 49.
    
 0.676
WDR64
WD repeat domain 64.
      
 0.635
FGFRL1
Fibroblast growth factor receptor like 1.
   
  
 0.635
ENSMLEP00000024108
Bromo domain-containing protein.
   
  
 0.593
BRD7
Bromo domain-containing protein.
   
  
 0.593
NAGPA
N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase.
      
 0.572
BPTF
Bromodomain PHD finger transcription factor.
    
  0.560
TRIP12
Thyroid hormone receptor interactor 12.
    
 
 0.546
CA7
Carbonic anhydrase 7; Belongs to the alpha-carbonic anhydrase family.
      
 0.535
Your Current Organism:
Mandrillus leucophaeus
NCBI taxonomy Id: 9568
Other names: M. leucophaeus, Papio leucophaeus, drill
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.