STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF113ARing finger protein 113A. (344 aa)    
Predicted Functional Partners:
CWC27
CWC27 spliceosome associated cyclophilin.
    
 0.980
CWC22
CWC22 spliceosome associated protein homolog.
    
 0.978
DHX16
DEAH-box helicase 16.
    
 0.974
SF3B2
Splicing factor 3b subunit 2.
    
 0.954
SNRNP200
Small nuclear ribonucleoprotein U5 subunit 200.
   
 0.950
SF3B1
Splicing factor 3b subunit 1.
    
 0.943
BUD13
BUD13 homolog.
    
 0.940
CDC40
Cell division cycle 40.
    
 0.937
SNIP1
Smad nuclear interacting protein 1.
   
 0.936
CDC5L
Cell division cycle 5 like.
    
 
 0.933
Your Current Organism:
Mandrillus leucophaeus
NCBI taxonomy Id: 9568
Other names: M. leucophaeus, Papio leucophaeus, drill
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.