STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRIM47Tripartite motif containing 47. (516 aa)    
Predicted Functional Partners:
DDX58
DExD/H-box helicase 58.
   
 0.860
IFIH1
Interferon induced with helicase C domain 1.
   
 0.705
UBE2L6
Ubiquitin conjugating enzyme E2 L6; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.639
CYLD
CYLD lysine 63 deubiquitinase; Belongs to the peptidase C19 family.
    
 
 0.569
TRIM62
Tripartite motif containing 62.
      
 0.534
ISG15
ISG15 ubiquitin like modifier.
   
 0.484
RPS27A
Ubiquitin-like domain-containing protein.
    
  0.473
LOC105541098
Ubiquitin-like domain-containing protein.
    
  0.473
LOC105536598
Ubiquitin-like domain-containing protein.
    
  0.473
ENSMLEP00000006240
Ubiquitin-like domain-containing protein.
    
  0.464
Your Current Organism:
Mandrillus leucophaeus
NCBI taxonomy Id: 9568
Other names: M. leucophaeus, Papio leucophaeus, drill
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.