STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF144BRBR-type E3 ubiquitin transferase. (303 aa)    
Predicted Functional Partners:
PRKDC
Protein kinase, DNA-activated, catalytic subunit.
    
 0.668
RNFT2
Ring finger protein, transmembrane 2.
      
 0.635
TRIP12
Thyroid hormone receptor interactor 12.
   
 
 0.620
RNF130
Ring finger protein 130.
     
 0.618
ENSMLEP00000034242
Uncharacterized protein.
    
 0.614
RNFT1
Ring finger protein, transmembrane 1.
      
 0.612
TMEM129
Transmembrane protein 129.
   
  
 0.589
RPS27A
Ubiquitin-like domain-containing protein.
    
 0.585
LOC105541098
Ubiquitin-like domain-containing protein.
    
 0.585
LOC105536598
Ubiquitin-like domain-containing protein.
    
 0.585
Your Current Organism:
Mandrillus leucophaeus
NCBI taxonomy Id: 9568
Other names: M. leucophaeus, Papio leucophaeus, drill
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.