Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
HARBI1Harbinger transposase derived 1. (349 aa)    
Predicted Functional Partners:
ZMYM3
Zinc finger MYM-type containing 3.
      
 0.724
ZMYM2
Zinc finger MYM-type containing 2.
      
 0.711
GIN1
Gypsy retrotransposon integrase 1.
      
 0.709
QRICH1
Glutamine rich 1.
      
 0.708
PGBD5
PiggyBac transposable element derived 5.
      
 0.701
RAG1
V(D)J recombination-activating protein 1; Catalytic component of the RAG complex, a multiprotein complex that mediates the DNA cleavage phase during V(D)J recombination. V(D)J recombination assembles a diverse repertoire of immunoglobulin and T-cell receptor genes in developing B and T- lymphocytes through rearrangement of different V (variable), in some cases D (diversity), and J (joining) gene segments. In the RAG complex, RAG1 mediates the DNA-binding to the conserved recombination signal sequences (RSS) and catalyzes the DNA cleavage activities by introducing a double-strand break [...]
      
 0.600
SHPK
FGGY_N domain-containing protein.
      
 0.593
RAG2
Recombination activating 2.
      
 0.589
ZNF451
Zinc finger protein 451.
      
 0.579
THAP9
THAP domain containing 9.
      
 0.556
Your Current Organism:
Mandrillus leucophaeus
NCBI taxonomy Id: 9568
Other names: M. leucophaeus, Papio leucophaeus, drill
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