STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105534783Histone H2B; Belongs to the histone H2B family. (126 aa)    
Predicted Functional Partners:
H2AC6
Histone H2A; Belongs to the histone H2A family.
 
 0.976
H2AC20
Histone H2A; Belongs to the histone H2A family.
 
 0.967
H2AJ
Histone H2A; Belongs to the histone H2A family.
 
 0.933
H2AC1
Histone H2A; Belongs to the histone H2A family.
 
 0.929
H2BC5
Histone H2B; Belongs to the histone H2B family.
  
 
0.914
BARD1
BRCA1 associated RING domain 1.
   
 0.911
SMARCB1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1.
    
 
 0.898
VRK1
VRK serine/threonine kinase 1; Belongs to the protein kinase superfamily.
    
   0.883
DNMT3B
DNA methyltransferase 3 beta; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.
    
 0.879
H2AC7
Histone H2A; Belongs to the histone H2A family.
 
 0.872
Your Current Organism:
Mandrillus leucophaeus
NCBI taxonomy Id: 9568
Other names: M. leucophaeus, Papio leucophaeus, drill
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.