STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COL6A6Collagen type VI alpha 6 chain. (2265 aa)    
Predicted Functional Partners:
CD44
CD44 molecule (Indian blood group).
    
 0.887
GP6
Glycoprotein VI platelet.
     
 0.881
ITGA9
Integrin subunit alpha 9; Belongs to the integrin alpha chain family.
     
 0.828
ITGA6
Integrin subunit alpha 6; Belongs to the integrin alpha chain family.
     
 0.813
ITGA2B
Integrin subunit alpha 2b; Belongs to the integrin alpha chain family.
    
 0.788
ITGA7
Integrin subunit alpha 7; Belongs to the integrin alpha chain family.
     
 0.780
ITGB6
Integrin beta; Belongs to the integrin beta chain family.
    
 0.780
ITGB8
Integrin beta; Belongs to the integrin beta chain family.
    
 0.780
ITGA8
Integrin subunit alpha 8; Belongs to the integrin alpha chain family.
    
 0.779
ITGA11
Integrin subunit alpha 11; Belongs to the integrin alpha chain family.
    
0.776
Your Current Organism:
Mandrillus leucophaeus
NCBI taxonomy Id: 9568
Other names: M. leucophaeus, Papio leucophaeus, drill
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