Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSMLEP00000025633 | GATA5 | ENSMLEP00000025633 | ENSMLEP00000016235 | Uncharacterized protein. | GATA binding protein 5. | 0.705 |
ENSMLEP00000025633 | LMO2 | ENSMLEP00000025633 | ENSMLEP00000010024 | Uncharacterized protein. | LIM domain only 2. | 0.519 |
ENSMLEP00000025633 | TAL1 | ENSMLEP00000025633 | ENSMLEP00000036293 | Uncharacterized protein. | TAL bHLH transcription factor 1, erythroid differentiation factor. | 0.494 |
FOXA2 | GATA5 | ENSMLEP00000012464 | ENSMLEP00000016235 | Forkhead box A2. | GATA binding protein 5. | 0.607 |
FOXA2 | NKX2-5 | ENSMLEP00000012464 | ENSMLEP00000000144 | Forkhead box A2. | NK2 homeobox 5. | 0.416 |
GATA5 | ENSMLEP00000025633 | ENSMLEP00000016235 | ENSMLEP00000025633 | GATA binding protein 5. | Uncharacterized protein. | 0.705 |
GATA5 | FOXA2 | ENSMLEP00000016235 | ENSMLEP00000012464 | GATA binding protein 5. | Forkhead box A2. | 0.607 |
GATA5 | LMCD1 | ENSMLEP00000016235 | ENSMLEP00000013384 | GATA binding protein 5. | LIM and cysteine rich domains 1. | 0.598 |
GATA5 | LMO2 | ENSMLEP00000016235 | ENSMLEP00000010024 | GATA binding protein 5. | LIM domain only 2. | 0.758 |
GATA5 | NFATC2 | ENSMLEP00000016235 | ENSMLEP00000020794 | GATA binding protein 5. | Nuclear factor of activated T cells 2. | 0.564 |
GATA5 | NFATC4 | ENSMLEP00000016235 | ENSMLEP00000010883 | GATA binding protein 5. | Nuclear factor of activated T cells 4. | 0.570 |
GATA5 | NKX2-5 | ENSMLEP00000016235 | ENSMLEP00000000144 | GATA binding protein 5. | NK2 homeobox 5. | 0.799 |
GATA5 | SRF | ENSMLEP00000016235 | ENSMLEP00000002617 | GATA binding protein 5. | Serum response factor. | 0.704 |
GATA5 | TAL1 | ENSMLEP00000016235 | ENSMLEP00000036293 | GATA binding protein 5. | TAL bHLH transcription factor 1, erythroid differentiation factor. | 0.660 |
GATA5 | ZFPM2 | ENSMLEP00000016235 | ENSMLEP00000028063 | GATA binding protein 5. | Zinc finger protein, FOG family member 2. | 0.672 |
LMCD1 | GATA5 | ENSMLEP00000013384 | ENSMLEP00000016235 | LIM and cysteine rich domains 1. | GATA binding protein 5. | 0.598 |
LMO2 | ENSMLEP00000025633 | ENSMLEP00000010024 | ENSMLEP00000025633 | LIM domain only 2. | Uncharacterized protein. | 0.519 |
LMO2 | GATA5 | ENSMLEP00000010024 | ENSMLEP00000016235 | LIM domain only 2. | GATA binding protein 5. | 0.758 |
LMO2 | TAL1 | ENSMLEP00000010024 | ENSMLEP00000036293 | LIM domain only 2. | TAL bHLH transcription factor 1, erythroid differentiation factor. | 0.983 |
NFATC2 | GATA5 | ENSMLEP00000020794 | ENSMLEP00000016235 | Nuclear factor of activated T cells 2. | GATA binding protein 5. | 0.564 |
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