Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
APEX1 | APEX2 | ENSMLEP00000036008 | ENSMLEP00000008093 | DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends. | DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends. | 0.904 |
APEX1 | CREBBP | ENSMLEP00000036008 | ENSMLEP00000000887 | DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends. | CREB binding protein. | 0.434 |
APEX1 | MBD4 | ENSMLEP00000036008 | ENSMLEP00000005744 | DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends. | Methyl-CpG-binding domain protein 4; Mismatch-specific DNA N-glycosylase involved in DNA repair. Has thymine glycosylase activity and is specific for G:T mismatches within methylated and unmethylated CpG sites. Can also remove uracil or 5-fluorouracil in G:U mismatches. Has no lyase activity. Was first identified as methyl-CpG-binding protein. | 0.572 |
APEX1 | TDG | ENSMLEP00000036008 | ENSMLEP00000016603 | DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends. | Thymine DNA glycosylase. | 0.804 |
APEX2 | APEX1 | ENSMLEP00000008093 | ENSMLEP00000036008 | DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends. | DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends. | 0.904 |
APEX2 | MBD4 | ENSMLEP00000008093 | ENSMLEP00000005744 | DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends. | Methyl-CpG-binding domain protein 4; Mismatch-specific DNA N-glycosylase involved in DNA repair. Has thymine glycosylase activity and is specific for G:T mismatches within methylated and unmethylated CpG sites. Can also remove uracil or 5-fluorouracil in G:U mismatches. Has no lyase activity. Was first identified as methyl-CpG-binding protein. | 0.414 |
APEX2 | TDG | ENSMLEP00000008093 | ENSMLEP00000016603 | DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends. | Thymine DNA glycosylase. | 0.773 |
CREBBP | APEX1 | ENSMLEP00000000887 | ENSMLEP00000036008 | CREB binding protein. | DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends. | 0.434 |
CREBBP | ENSMLEP00000015845 | ENSMLEP00000000887 | ENSMLEP00000015845 | CREB binding protein. | Rad60-SLD domain-containing protein. | 0.855 |
CREBBP | ENSMLEP00000015948 | ENSMLEP00000000887 | ENSMLEP00000015948 | CREB binding protein. | Uncharacterized protein. | 0.855 |
CREBBP | ENSMLEP00000030622 | ENSMLEP00000000887 | ENSMLEP00000030622 | CREB binding protein. | Small ubiquitin-related modifier. | 0.954 |
CREBBP | SUMO1 | ENSMLEP00000000887 | ENSMLEP00000020472 | CREB binding protein. | Ubiquitin-like domain-containing protein. | 0.855 |
CREBBP | TDG | ENSMLEP00000000887 | ENSMLEP00000016603 | CREB binding protein. | Thymine DNA glycosylase. | 0.805 |
ENSMLEP00000000876 | ENSMLEP00000015845 | ENSMLEP00000000876 | ENSMLEP00000015845 | Ubiquitin-like domain-containing protein. | Rad60-SLD domain-containing protein. | 0.435 |
ENSMLEP00000000876 | ENSMLEP00000015948 | ENSMLEP00000000876 | ENSMLEP00000015948 | Ubiquitin-like domain-containing protein. | Uncharacterized protein. | 0.413 |
ENSMLEP00000000876 | ENSMLEP00000030622 | ENSMLEP00000000876 | ENSMLEP00000030622 | Ubiquitin-like domain-containing protein. | Small ubiquitin-related modifier. | 0.581 |
ENSMLEP00000000876 | SUMO1 | ENSMLEP00000000876 | ENSMLEP00000020472 | Ubiquitin-like domain-containing protein. | Ubiquitin-like domain-containing protein. | 0.437 |
ENSMLEP00000000876 | TDG | ENSMLEP00000000876 | ENSMLEP00000016603 | Ubiquitin-like domain-containing protein. | Thymine DNA glycosylase. | 0.771 |
ENSMLEP00000015845 | CREBBP | ENSMLEP00000015845 | ENSMLEP00000000887 | Rad60-SLD domain-containing protein. | CREB binding protein. | 0.855 |
ENSMLEP00000015845 | ENSMLEP00000000876 | ENSMLEP00000015845 | ENSMLEP00000000876 | Rad60-SLD domain-containing protein. | Ubiquitin-like domain-containing protein. | 0.435 |
page 1 of 3