Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ATG12 | ATG16L1 | ENSMLEP00000013621 | ENSMLEP00000008890 | Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family. | Autophagy related 16 like 1. | 0.999 |
ATG12 | ATG16L2 | ENSMLEP00000013621 | ENSMLEP00000022516 | Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family. | Autophagy related 16 like 2. | 0.999 |
ATG12 | ATG2A | ENSMLEP00000013621 | ENSMLEP00000016569 | Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family. | Autophagy related 2A. | 0.483 |
ATG12 | ATG2B | ENSMLEP00000013621 | ENSMLEP00000039712 | Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family. | Autophagy related 2B. | 0.483 |
ATG12 | ATG5 | ENSMLEP00000013621 | ENSMLEP00000020518 | Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family. | Autophagy protein 5; Involved in autophagic vesicle formation. | 0.999 |
ATG12 | ATG9A | ENSMLEP00000013621 | ENSMLEP00000028637 | Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family. | Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family. | 0.638 |
ATG12 | ULK1 | ENSMLEP00000013621 | ENSMLEP00000037459 | Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family. | Unc-51 like autophagy activating kinase 1. | 0.935 |
ATG12 | ULK2 | ENSMLEP00000013621 | ENSMLEP00000034556 | Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family. | Unc-51 like autophagy activating kinase 2. | 0.934 |
ATG12 | WIPI1 | ENSMLEP00000013621 | ENSMLEP00000035604 | Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family. | WD repeat domain, phosphoinositide interacting 1. | 0.915 |
ATG12 | WIPI2 | ENSMLEP00000013621 | ENSMLEP00000017925 | Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family. | WD repeat domain, phosphoinositide interacting 2. | 0.936 |
ATG16L1 | ATG12 | ENSMLEP00000008890 | ENSMLEP00000013621 | Autophagy related 16 like 1. | Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family. | 0.999 |
ATG16L1 | ATG16L2 | ENSMLEP00000008890 | ENSMLEP00000022516 | Autophagy related 16 like 1. | Autophagy related 16 like 2. | 0.925 |
ATG16L1 | ATG5 | ENSMLEP00000008890 | ENSMLEP00000020518 | Autophagy related 16 like 1. | Autophagy protein 5; Involved in autophagic vesicle formation. | 0.999 |
ATG16L1 | ATG9A | ENSMLEP00000008890 | ENSMLEP00000028637 | Autophagy related 16 like 1. | Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family. | 0.548 |
ATG16L1 | ULK1 | ENSMLEP00000008890 | ENSMLEP00000037459 | Autophagy related 16 like 1. | Unc-51 like autophagy activating kinase 1. | 0.823 |
ATG16L1 | ULK2 | ENSMLEP00000008890 | ENSMLEP00000034556 | Autophagy related 16 like 1. | Unc-51 like autophagy activating kinase 2. | 0.747 |
ATG16L1 | WIPI1 | ENSMLEP00000008890 | ENSMLEP00000035604 | Autophagy related 16 like 1. | WD repeat domain, phosphoinositide interacting 1. | 0.979 |
ATG16L1 | WIPI2 | ENSMLEP00000008890 | ENSMLEP00000017925 | Autophagy related 16 like 1. | WD repeat domain, phosphoinositide interacting 2. | 0.987 |
ATG16L2 | ATG12 | ENSMLEP00000022516 | ENSMLEP00000013621 | Autophagy related 16 like 2. | Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family. | 0.999 |
ATG16L2 | ATG16L1 | ENSMLEP00000022516 | ENSMLEP00000008890 | Autophagy related 16 like 2. | Autophagy related 16 like 1. | 0.925 |
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