STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAT1FAT atypical cadherin 1. (4588 aa)    
Predicted Functional Partners:
FRMD6
FERM domain containing 6.
    
 0.630
SLC18A1
Solute carrier family 18 member A1.
      
 0.590
SEMA3B
Semaphorin 3B; Belongs to the semaphorin family.
    
 
 0.585
DAG1
Dystroglycan 1.
      
 0.585
ATP11A
Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.
      
 0.585
LIX1L
Limb and CNS expressed 1 like.
   
 0.531
LIX1
Limb and CNS expressed 1.
   
 0.531
ATN1
Atrophin 1.
    
 0.518
KIRREL1
Kirre like nephrin family adhesion molecule 1.
   
 
 0.513
NPHS2
NPHS2 stomatin family member, podocin.
    
 
 0.512
Your Current Organism:
Mandrillus leucophaeus
NCBI taxonomy Id: 9568
Other names: M. leucophaeus, Papio leucophaeus, drill
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.