Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CCDC24 | ENSMLEP00000014360 | ENSMLEP00000024437 | ENSMLEP00000014360 | Coiled-coil domain containing 24. | Fe-S_biosyn domain-containing protein. | 0.635 |
CCDC24 | ERI3 | ENSMLEP00000024437 | ENSMLEP00000003049 | Coiled-coil domain containing 24. | ERI1 exoribonuclease family member 3. | 0.485 |
CCDC24 | MED16 | ENSMLEP00000024437 | ENSMLEP00000016648 | Coiled-coil domain containing 24. | Mediator of RNA polymerase II transcription subunit 16; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.701 |
CCDC24 | PALM3 | ENSMLEP00000024437 | ENSMLEP00000013798 | Coiled-coil domain containing 24. | Paralemmin 3. | 0.572 |
CCDC24 | RAB11A | ENSMLEP00000024437 | ENSMLEP00000016638 | Coiled-coil domain containing 24. | RAB11A, member RAS oncogene family. | 0.578 |
CCDC24 | RAB11B | ENSMLEP00000024437 | ENSMLEP00000012934 | Coiled-coil domain containing 24. | Uncharacterized protein. | 0.578 |
CCDC24 | RAB25 | ENSMLEP00000024437 | ENSMLEP00000005795 | Coiled-coil domain containing 24. | RAB25, member RAS oncogene family. | 0.578 |
CCDC24 | RABL2B | ENSMLEP00000024437 | ENSMLEP00000016881 | Coiled-coil domain containing 24. | Uncharacterized protein. | 0.742 |
CCDC24 | RNF220 | ENSMLEP00000024437 | ENSMLEP00000013746 | Coiled-coil domain containing 24. | Ring finger protein 220. | 0.493 |
CCDC24 | ZNF644 | ENSMLEP00000024437 | ENSMLEP00000028304 | Coiled-coil domain containing 24. | Zinc finger protein 644. | 0.776 |
ENSMLEP00000014360 | CCDC24 | ENSMLEP00000014360 | ENSMLEP00000024437 | Fe-S_biosyn domain-containing protein. | Coiled-coil domain containing 24. | 0.635 |
ENSMLEP00000014360 | MED16 | ENSMLEP00000014360 | ENSMLEP00000016648 | Fe-S_biosyn domain-containing protein. | Mediator of RNA polymerase II transcription subunit 16; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.616 |
ERI3 | CCDC24 | ENSMLEP00000003049 | ENSMLEP00000024437 | ERI1 exoribonuclease family member 3. | Coiled-coil domain containing 24. | 0.485 |
ERI3 | RNF220 | ENSMLEP00000003049 | ENSMLEP00000013746 | ERI1 exoribonuclease family member 3. | Ring finger protein 220. | 0.538 |
MED16 | CCDC24 | ENSMLEP00000016648 | ENSMLEP00000024437 | Mediator of RNA polymerase II transcription subunit 16; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Coiled-coil domain containing 24. | 0.701 |
MED16 | ENSMLEP00000014360 | ENSMLEP00000016648 | ENSMLEP00000014360 | Mediator of RNA polymerase II transcription subunit 16; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Fe-S_biosyn domain-containing protein. | 0.616 |
MED16 | PALM3 | ENSMLEP00000016648 | ENSMLEP00000013798 | Mediator of RNA polymerase II transcription subunit 16; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Paralemmin 3. | 0.571 |
MED16 | ZNF644 | ENSMLEP00000016648 | ENSMLEP00000028304 | Mediator of RNA polymerase II transcription subunit 16; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Zinc finger protein 644. | 0.576 |
PALM3 | CCDC24 | ENSMLEP00000013798 | ENSMLEP00000024437 | Paralemmin 3. | Coiled-coil domain containing 24. | 0.572 |
PALM3 | MED16 | ENSMLEP00000013798 | ENSMLEP00000016648 | Paralemmin 3. | Mediator of RNA polymerase II transcription subunit 16; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.571 |
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