STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHGAChromogranin A. (457 aa)    
Predicted Functional Partners:
CHGB
Chromogranin B.
   
 
0.941
TGFB1
Transforming growth factor beta 1.
      
 0.807
CD79A
CD79a molecule.
      
 0.618
SYP
Synaptophysin.
   
  
 0.610
MMD
Monocyte to macrophage differentiation associated.
   
  
 0.609
SST
Somatostatin.
   
  
 0.584
SCG3
Secretogranin III.
   
  
 0.579
ENSMLEP00000002116
Pentaxin.
      
 0.577
NPS
Neuropeptide S.
      
 0.564
TRPM8
Transient receptor potential cation channel subfamily M member 8.
      
 0.562
Your Current Organism:
Mandrillus leucophaeus
NCBI taxonomy Id: 9568
Other names: M. leucophaeus, Papio leucophaeus, drill
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.