Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BMP4 | CDX2 | ENSMLEP00000039099 | ENSMLEP00000026461 | Bone morphogenetic protein 4. | Caudal type homeobox 2. | 0.564 |
BMP4 | ENSMLEP00000033784 | ENSMLEP00000039099 | ENSMLEP00000033784 | Bone morphogenetic protein 4. | Sox C-terminal domain-containing protein. | 0.574 |
BMP4 | GATA4 | ENSMLEP00000039099 | ENSMLEP00000008648 | Bone morphogenetic protein 4. | GATA binding protein 4. | 0.750 |
BMP4 | POU5F1 | ENSMLEP00000039099 | ENSMLEP00000034896 | Bone morphogenetic protein 4. | POU domain protein. | 0.637 |
BMP4 | TFAP2C | ENSMLEP00000039099 | ENSMLEP00000012834 | Bone morphogenetic protein 4. | Transcription factor AP-2 gamma. | 0.535 |
CDX2 | BMP4 | ENSMLEP00000026461 | ENSMLEP00000039099 | Caudal type homeobox 2. | Bone morphogenetic protein 4. | 0.564 |
CDX2 | ELF5 | ENSMLEP00000026461 | ENSMLEP00000002777 | Caudal type homeobox 2. | E74 like ETS transcription factor 5. | 0.612 |
CDX2 | ENSMLEP00000033784 | ENSMLEP00000026461 | ENSMLEP00000033784 | Caudal type homeobox 2. | Sox C-terminal domain-containing protein. | 0.611 |
CDX2 | EOMES | ENSMLEP00000026461 | ENSMLEP00000023660 | Caudal type homeobox 2. | Eomesodermin. | 0.572 |
CDX2 | GATA2 | ENSMLEP00000026461 | ENSMLEP00000034509 | Caudal type homeobox 2. | GATA binding protein 2. | 0.544 |
CDX2 | GATA3 | ENSMLEP00000026461 | ENSMLEP00000027525 | Caudal type homeobox 2. | GATA binding protein 3. | 0.562 |
CDX2 | GATA4 | ENSMLEP00000026461 | ENSMLEP00000008648 | Caudal type homeobox 2. | GATA binding protein 4. | 0.568 |
CDX2 | KRT7 | ENSMLEP00000026461 | ENSMLEP00000039207 | Caudal type homeobox 2. | Keratin 7; Belongs to the intermediate filament family. | 0.572 |
CDX2 | POU5F1 | ENSMLEP00000026461 | ENSMLEP00000034896 | Caudal type homeobox 2. | POU domain protein. | 0.644 |
CDX2 | TFAP2C | ENSMLEP00000026461 | ENSMLEP00000012834 | Caudal type homeobox 2. | Transcription factor AP-2 gamma. | 0.568 |
ELF5 | CDX2 | ENSMLEP00000002777 | ENSMLEP00000026461 | E74 like ETS transcription factor 5. | Caudal type homeobox 2. | 0.612 |
ELF5 | EOMES | ENSMLEP00000002777 | ENSMLEP00000023660 | E74 like ETS transcription factor 5. | Eomesodermin. | 0.546 |
ELF5 | GATA3 | ENSMLEP00000002777 | ENSMLEP00000027525 | E74 like ETS transcription factor 5. | GATA binding protein 3. | 0.543 |
ELF5 | KRT7 | ENSMLEP00000002777 | ENSMLEP00000039207 | E74 like ETS transcription factor 5. | Keratin 7; Belongs to the intermediate filament family. | 0.568 |
ELF5 | TFAP2C | ENSMLEP00000002777 | ENSMLEP00000012834 | E74 like ETS transcription factor 5. | Transcription factor AP-2 gamma. | 0.536 |
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