Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CREBBP | CTNNB1 | ENSMLEP00000000887 | ENSMLEP00000009207 | CREB binding protein. | Catenin beta 1. | 0.991 |
CREBBP | EP300 | ENSMLEP00000000887 | ENSMLEP00000031242 | CREB binding protein. | E1A binding protein p300. | 0.996 |
CREBBP | HNF4A | ENSMLEP00000000887 | ENSMLEP00000027255 | CREB binding protein. | Hepatocyte nuclear factor 4 alpha. | 0.794 |
CREBBP | MED1 | ENSMLEP00000000887 | ENSMLEP00000028914 | CREB binding protein. | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.771 |
CREBBP | NCOA1 | ENSMLEP00000000887 | ENSMLEP00000017206 | CREB binding protein. | Nuclear receptor coactivator. | 0.988 |
CREBBP | NCOA2 | ENSMLEP00000000887 | ENSMLEP00000020494 | CREB binding protein. | Nuclear receptor coactivator. | 0.960 |
CREBBP | NCOR2 | ENSMLEP00000000887 | ENSMLEP00000023825 | CREB binding protein. | Nuclear receptor corepressor 2. | 0.728 |
CREBBP | PPARGC1A | ENSMLEP00000000887 | ENSMLEP00000020141 | CREB binding protein. | PPARG coactivator 1 alpha. | 0.679 |
CTNNB1 | CREBBP | ENSMLEP00000009207 | ENSMLEP00000000887 | Catenin beta 1. | CREB binding protein. | 0.991 |
CTNNB1 | EP300 | ENSMLEP00000009207 | ENSMLEP00000031242 | Catenin beta 1. | E1A binding protein p300. | 0.989 |
CTNNB1 | HNF4A | ENSMLEP00000009207 | ENSMLEP00000027255 | Catenin beta 1. | Hepatocyte nuclear factor 4 alpha. | 0.633 |
EP300 | CREBBP | ENSMLEP00000031242 | ENSMLEP00000000887 | E1A binding protein p300. | CREB binding protein. | 0.996 |
EP300 | CTNNB1 | ENSMLEP00000031242 | ENSMLEP00000009207 | E1A binding protein p300. | Catenin beta 1. | 0.989 |
EP300 | HNF4A | ENSMLEP00000031242 | ENSMLEP00000027255 | E1A binding protein p300. | Hepatocyte nuclear factor 4 alpha. | 0.611 |
EP300 | MED1 | ENSMLEP00000031242 | ENSMLEP00000028914 | E1A binding protein p300. | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.742 |
EP300 | NCOA1 | ENSMLEP00000031242 | ENSMLEP00000017206 | E1A binding protein p300. | Nuclear receptor coactivator. | 0.974 |
EP300 | NCOA2 | ENSMLEP00000031242 | ENSMLEP00000020494 | E1A binding protein p300. | Nuclear receptor coactivator. | 0.960 |
EP300 | NCOR2 | ENSMLEP00000031242 | ENSMLEP00000023825 | E1A binding protein p300. | Nuclear receptor corepressor 2. | 0.677 |
EP300 | PPARGC1A | ENSMLEP00000031242 | ENSMLEP00000020141 | E1A binding protein p300. | PPARG coactivator 1 alpha. | 0.763 |
HNF1A | HNF4A | ENSMLEP00000030976 | ENSMLEP00000027255 | HNF1 homeobox A. | Hepatocyte nuclear factor 4 alpha. | 0.737 |
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