Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
B2M | CALR | ENSMLEP00000010574 | ENSMLEP00000037878 | Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system. | Calreticulin. | 0.855 |
B2M | CD8A | ENSMLEP00000010574 | ENSMLEP00000004566 | Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system. | CD8a molecule. | 0.930 |
B2M | CD8B | ENSMLEP00000010574 | ENSMLEP00000027133 | Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system. | Ig-like domain-containing protein. | 0.760 |
B2M | ENSMLEP00000028396 | ENSMLEP00000010574 | ENSMLEP00000028396 | Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system. | IGc1 domain-containing protein. | 0.739 |
B2M | KLRD1 | ENSMLEP00000010574 | ENSMLEP00000028181 | Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system. | Killer cell lectin like receptor D1. | 0.669 |
B2M | PDIA3 | ENSMLEP00000010574 | ENSMLEP00000010203 | Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system. | Protein disulfide-isomerase. | 0.886 |
B2M | TAPBP | ENSMLEP00000010574 | ENSMLEP00000006203 | Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system. | TAP binding protein. | 0.902 |
B2M | TRAC | ENSMLEP00000010574 | ENSMLEP00000031417 | Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system. | T cell receptor alpha constant. | 0.913 |
CALR | B2M | ENSMLEP00000037878 | ENSMLEP00000010574 | Calreticulin. | Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system. | 0.855 |
CALR | ENSMLEP00000028396 | ENSMLEP00000037878 | ENSMLEP00000028396 | Calreticulin. | IGc1 domain-containing protein. | 0.565 |
CALR | LOC105541595 | ENSMLEP00000037878 | ENSMLEP00000024617 | Calreticulin. | RPA_C domain-containing protein. | 0.676 |
CALR | PDIA3 | ENSMLEP00000037878 | ENSMLEP00000010203 | Calreticulin. | Protein disulfide-isomerase. | 0.998 |
CALR | RPA2 | ENSMLEP00000037878 | ENSMLEP00000014816 | Calreticulin. | Replication protein A2. | 0.676 |
CALR | TAPBP | ENSMLEP00000037878 | ENSMLEP00000006203 | Calreticulin. | TAP binding protein. | 0.995 |
CD8A | B2M | ENSMLEP00000004566 | ENSMLEP00000010574 | CD8a molecule. | Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system. | 0.930 |
CD8A | CD8B | ENSMLEP00000004566 | ENSMLEP00000027133 | CD8a molecule. | Ig-like domain-containing protein. | 0.998 |
CD8A | ENSMLEP00000028396 | ENSMLEP00000004566 | ENSMLEP00000028396 | CD8a molecule. | IGc1 domain-containing protein. | 0.780 |
CD8A | KLRD1 | ENSMLEP00000004566 | ENSMLEP00000028181 | CD8a molecule. | Killer cell lectin like receptor D1. | 0.733 |
CD8A | LOC105541595 | ENSMLEP00000004566 | ENSMLEP00000024617 | CD8a molecule. | RPA_C domain-containing protein. | 0.885 |
CD8A | RPA2 | ENSMLEP00000004566 | ENSMLEP00000014816 | CD8a molecule. | Replication protein A2. | 0.885 |
page 1 of 4