Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
IYD | RNASEH1 | ENSMLEP00000020971 | ENSMLEP00000030308 | Iodotyrosine deiodinase. | RNase H domain-containing protein. | 0.633 |
LOC105541671 | RNASEH1 | ENSMLEP00000036910 | ENSMLEP00000030308 | Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. | RNase H domain-containing protein. | 0.595 |
LOC105541671 | RNASEH2A | ENSMLEP00000036910 | ENSMLEP00000039230 | Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. | Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family. | 0.935 |
LOC105541671 | SSBP1 | ENSMLEP00000036910 | ENSMLEP00000030684 | Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. | Single stranded DNA binding protein 1. | 0.606 |
LOC105541671 | TYMS | ENSMLEP00000036910 | ENSMLEP00000017773 | Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. | Thymidylate synthetase. | 0.888 |
NADK | NT5E | ENSMLEP00000020578 | ENSMLEP00000038771 | NAD kinase. | 5'-nucleotidase ecto; Belongs to the 5'-nucleotidase family. | 0.830 |
NADK | NUDT12 | ENSMLEP00000020578 | ENSMLEP00000027742 | NAD kinase. | Nudix hydrolase 12. | 0.895 |
NADK | NUDT13 | ENSMLEP00000020578 | ENSMLEP00000001271 | NAD kinase. | Nudix hydrolase 13. | 0.769 |
NADK | RNASEH1 | ENSMLEP00000020578 | ENSMLEP00000030308 | NAD kinase. | RNase H domain-containing protein. | 0.844 |
NADK | TYMS | ENSMLEP00000020578 | ENSMLEP00000017773 | NAD kinase. | Thymidylate synthetase. | 0.418 |
NT5E | NADK | ENSMLEP00000038771 | ENSMLEP00000020578 | 5'-nucleotidase ecto; Belongs to the 5'-nucleotidase family. | NAD kinase. | 0.830 |
NT5E | NUDT12 | ENSMLEP00000038771 | ENSMLEP00000027742 | 5'-nucleotidase ecto; Belongs to the 5'-nucleotidase family. | Nudix hydrolase 12. | 0.901 |
NT5E | NUDT13 | ENSMLEP00000038771 | ENSMLEP00000001271 | 5'-nucleotidase ecto; Belongs to the 5'-nucleotidase family. | Nudix hydrolase 13. | 0.846 |
NT5E | RNASEH1 | ENSMLEP00000038771 | ENSMLEP00000030308 | 5'-nucleotidase ecto; Belongs to the 5'-nucleotidase family. | RNase H domain-containing protein. | 0.617 |
NT5E | TYMS | ENSMLEP00000038771 | ENSMLEP00000017773 | 5'-nucleotidase ecto; Belongs to the 5'-nucleotidase family. | Thymidylate synthetase. | 0.910 |
NUDT12 | NADK | ENSMLEP00000027742 | ENSMLEP00000020578 | Nudix hydrolase 12. | NAD kinase. | 0.895 |
NUDT12 | NT5E | ENSMLEP00000027742 | ENSMLEP00000038771 | Nudix hydrolase 12. | 5'-nucleotidase ecto; Belongs to the 5'-nucleotidase family. | 0.901 |
NUDT12 | NUDT13 | ENSMLEP00000027742 | ENSMLEP00000001271 | Nudix hydrolase 12. | Nudix hydrolase 13. | 0.768 |
NUDT12 | RNASEH1 | ENSMLEP00000027742 | ENSMLEP00000030308 | Nudix hydrolase 12. | RNase H domain-containing protein. | 0.737 |
NUDT13 | NADK | ENSMLEP00000001271 | ENSMLEP00000020578 | Nudix hydrolase 13. | NAD kinase. | 0.769 |
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