Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ARID5B | C16orf87 | ENSMLEP00000008387 | ENSMLEP00000034062 | AT-rich interaction domain 5B. | Chromosome 16 open reading frame 87. | 0.663 |
C16orf87 | ARID5B | ENSMLEP00000034062 | ENSMLEP00000008387 | Chromosome 16 open reading frame 87. | AT-rich interaction domain 5B. | 0.663 |
C16orf87 | MIER1 | ENSMLEP00000034062 | ENSMLEP00000034967 | Chromosome 16 open reading frame 87. | MIER1 transcriptional regulator. | 0.525 |
C16orf87 | MIER3 | ENSMLEP00000034062 | ENSMLEP00000022524 | Chromosome 16 open reading frame 87. | MIER family member 3. | 0.618 |
C16orf87 | VPS35 | ENSMLEP00000034062 | ENSMLEP00000008722 | Chromosome 16 open reading frame 87. | Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting. | 0.434 |
MIER1 | C16orf87 | ENSMLEP00000034967 | ENSMLEP00000034062 | MIER1 transcriptional regulator. | Chromosome 16 open reading frame 87. | 0.525 |
MIER3 | C16orf87 | ENSMLEP00000022524 | ENSMLEP00000034062 | MIER family member 3. | Chromosome 16 open reading frame 87. | 0.618 |
VPS35 | C16orf87 | ENSMLEP00000008722 | ENSMLEP00000034062 | Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting. | Chromosome 16 open reading frame 87. | 0.434 |