Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CAMKMT | SUV39H2 | ENSMLEP00000009590 | ENSMLEP00000040410 | Calmodulin-lysine N-methyltransferase. | Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily. | 0.765 |
CBX5 | SUV39H2 | ENSMLEP00000025111 | ENSMLEP00000040410 | Chromobox 5. | Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily. | 0.671 |
CDYL | CDYL2 | ENSMLEP00000002636 | ENSMLEP00000039306 | Chromodomain Y like. | Chromodomain Y like 2. | 0.628 |
CDYL | SUV39H2 | ENSMLEP00000002636 | ENSMLEP00000040410 | Chromodomain Y like. | Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily. | 0.807 |
CDYL2 | CDYL | ENSMLEP00000039306 | ENSMLEP00000002636 | Chromodomain Y like 2. | Chromodomain Y like. | 0.628 |
CDYL2 | SUV39H2 | ENSMLEP00000039306 | ENSMLEP00000040410 | Chromodomain Y like 2. | Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily. | 0.807 |
DDB1 | SUV39H2 | ENSMLEP00000040250 | ENSMLEP00000040410 | Damage specific DNA binding protein 1. | Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily. | 0.748 |
KDM6B | SIRT1 | ENSMLEP00000027627 | ENSMLEP00000005263 | Lysine demethylase 6B. | Sirtuin 1. | 0.401 |
KDM6B | SUV39H2 | ENSMLEP00000027627 | ENSMLEP00000040410 | Lysine demethylase 6B. | Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily. | 0.702 |
PLOD2 | PLOD3 | ENSMLEP00000016890 | ENSMLEP00000025250 | Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2. | Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3. | 0.992 |
PLOD2 | SUV39H2 | ENSMLEP00000016890 | ENSMLEP00000040410 | Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2. | Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily. | 0.762 |
PLOD3 | PLOD2 | ENSMLEP00000025250 | ENSMLEP00000016890 | Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3. | Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2. | 0.992 |
PLOD3 | SUV39H2 | ENSMLEP00000025250 | ENSMLEP00000040410 | Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3. | Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily. | 0.835 |
RRP8 | SIRT1 | ENSMLEP00000021830 | ENSMLEP00000005263 | Ribosomal RNA-processing protein 8; Essential component of the eNoSC (energy-dependent nucleolar silencing) complex, a complex that mediates silencing of rDNA in response to intracellular energy status and acts by recruiting histone- modifying enzymes. The eNoSC complex is able to sense the energy status of cell: upon glucose starvation, elevation of NAD(+)/NADP(+) ratio activates SIRT1, leading to histone H3 deacetylation followed by dimethylation of H3 at 'Lys-9' (H3K9me2) by SUV39H1 and the formation of silent chromatin in the rDNA locus. In the complex, RRP8 binds to H3K9me2 and pr [...] | Sirtuin 1. | 0.920 |
RRP8 | SUV39H2 | ENSMLEP00000021830 | ENSMLEP00000040410 | Ribosomal RNA-processing protein 8; Essential component of the eNoSC (energy-dependent nucleolar silencing) complex, a complex that mediates silencing of rDNA in response to intracellular energy status and acts by recruiting histone- modifying enzymes. The eNoSC complex is able to sense the energy status of cell: upon glucose starvation, elevation of NAD(+)/NADP(+) ratio activates SIRT1, leading to histone H3 deacetylation followed by dimethylation of H3 at 'Lys-9' (H3K9me2) by SUV39H1 and the formation of silent chromatin in the rDNA locus. In the complex, RRP8 binds to H3K9me2 and pr [...] | Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily. | 0.676 |
SIRT1 | KDM6B | ENSMLEP00000005263 | ENSMLEP00000027627 | Sirtuin 1. | Lysine demethylase 6B. | 0.401 |
SIRT1 | RRP8 | ENSMLEP00000005263 | ENSMLEP00000021830 | Sirtuin 1. | Ribosomal RNA-processing protein 8; Essential component of the eNoSC (energy-dependent nucleolar silencing) complex, a complex that mediates silencing of rDNA in response to intracellular energy status and acts by recruiting histone- modifying enzymes. The eNoSC complex is able to sense the energy status of cell: upon glucose starvation, elevation of NAD(+)/NADP(+) ratio activates SIRT1, leading to histone H3 deacetylation followed by dimethylation of H3 at 'Lys-9' (H3K9me2) by SUV39H1 and the formation of silent chromatin in the rDNA locus. In the complex, RRP8 binds to H3K9me2 and pr [...] | 0.920 |
SIRT1 | SUV39H2 | ENSMLEP00000005263 | ENSMLEP00000040410 | Sirtuin 1. | Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily. | 0.721 |
SUV39H2 | CAMKMT | ENSMLEP00000040410 | ENSMLEP00000009590 | Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily. | Calmodulin-lysine N-methyltransferase. | 0.765 |
SUV39H2 | CBX5 | ENSMLEP00000040410 | ENSMLEP00000025111 | Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily. | Chromobox 5. | 0.671 |
page 1 of 2