STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDC12129.1Doubled CXXCH domain-containing protein. (690 aa)    
Predicted Functional Partners:
SDC12294.1
Doubled CXXCH domain-containing protein.
 
  0.893
SDC46852.1
Doubled CXXCH domain-containing protein.
  
  0.876
SDC39913.1
Decaheme c-type cytochrome, DmsE family.
  
  0.867
SDC12160.1
NHL repeat-containing protein.
 
     0.829
SDC12454.1
Doubled CXXCH domain-containing protein.
 
     0.797
SDC12353.1
Cytochrome c552.
 
     0.778
SDC40025.1
Hypothetical protein.
  
     0.768
SDC80905.1
Cytochrome c-type protein NapC.
  
  0.764
SDC38518.1
Outer membrane efflux protein.
  
     0.762
SDC28052.1
ATP-dependent helicase/DNAse subunit B.
  
     0.756
Your Current Organism:
Fuchsiella alkaliacetigena
NCBI taxonomy Id: 957042
Other names: DSM 24880, F. alkaliacetigena, Fuchsiella alkaliacetigena Zhilina et al. 2012, Halobacteroidaceae bacterium Z-7100, VKM B-2667, strain Z-7100
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.